RNA BASER Sequence Assembler 3.1


Free
1.34 MB
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Publisher Description



www.DnaBaser.com
Easy to use aligner software for RNA sequence contig assembly, contig editing, and mutation detection for Windows. It is a molecular biology software that can view and assemble sequences in contigs.Features: end clip, export sequences, assemblies, code detection.

Description: RNA Baser is an affordable alternative for assembly of RNA sequences and generation of contigs. File formats supported are abi, scf and seq (or FASTA). Chromatograms of the assembled sequences are displayed in a synchronized format with the generated contig. Ambiguous bases in the contig are highlighted and corrections are suggested by DnaBaser based on Quality Values of the trace files. Minimum input from the user required. Editing of ambiguous bases, including insertion and deletion, is possible. The settings of the assembly engine can be adjusted by the user. The user can personalize the appearance of chromatograms, nucleotides, background. The Quality Values of the trace files are displayed above chromatograms, so that the user can easily decide on the corrections in the final contig. Original chromatogram files are automatically trimmed based on Quality Values. The contig is automatically saved in FASTA format, in the same directory with the original trace files. By using a built-up database of primer and vector sequences, that can be edited/upgraded by the user, DnaBaser can be set to automatically trim the vector sequence out of the final contig.

Description: Easy to use aligner software for RNA sequencing tool, contig editing, and mutation detection for Windows. It is a molecular biology software that can view and assemble sequences in contigs.Features: end clip, export sequences, assemblies, code detection. It is a price alternative for RNA contig assembly. Download freeware tools for file conversion. trim vector sequence free program align alignment base convert consensus sequencing trace mac os x windows mutation primer, real-time pcr quality.

RNA BASER Sequence Assembler is a free software application from the Science subcategory, part of the Education category. The app is currently available in English, German and it was last updated on 2012-03-18. The program can be installed on Win 7, Win 8, WinME, Windows2000, WinXP, Windows2003, Windows Vista Starter, Windows Vista Home Basic, Windows Vista Home Premium, Windows Vista Business, Windows Vista Enterprise, Windows Vista Ultimate, Windows Vista Home Basic x64, Windows Vista Home Premium x64, Windows Vista Business x64, Windows Vista Enterprise x64, Windows Vista Ultimate x64, Linux, Mac OS X, Mac OS X 10.1, Mac OS X 10.2, Mac OS X 10.3, Mac OS X 10.4, Mac OS X 10.5, Mac Other.

RNA BASER Sequence Assembler (version 3.1) has a file size of 1.34 MB and is available for download from our website. Just click the green Download button above to start. Until now the program was downloaded 357 times. We already checked that the download link to be safe, however for your own protection we recommend that you scan the downloaded software with your antivirus.

Program Details



General

 
Publisher Heracle BioSoft SRL
Released Date 2012-03-18
Languages English, German

Category

 
Category Education
Subcategory Science

System requirements

 
Operating systems linux, mac, windows

Download information

 
File size 1.34 MB
Total downloads 357

Pricing

 
License model Free
Price N/A

Version History



Here you can find the changelog of RNA BASER Sequence Assembler since it was posted on our website on 2015-04-24. The latest version is 3.1 and it was updated on soft112.com on 2017-06-28. See below the changes in each version:

version 3.1

posted on 2012-03-18

Sequence assembly. Thousand of contigs can be assembled at once.

version 2.77

posted on 2009-01-05

Batch assembly. Thousand of contigs can be assembled at once.






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Release Date: 2012-03-18
Publisher: Heracle BioSoft SRL
Operating System: linux, mac, windows
Type: Free